DNA Binding Motif

						

			
Accessions: CUX1_methyl_1 (HT-SELEX2 May2017)

			
Names: CUX1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: ktATTGATyr
Weblogo: 
PSSM: P0      A      C      G      T
01   4769   4522   8936   7130      k
02   4298   6217   5965  19140      t
03  25357      0    218      0      A
04    349    277    225  25357      T
05      0   6306    219  25357      T
06      0      0  25357      1      G
07  25357     21    265      0      A
08      0      0      0  25357      T
09   5293  13738   1968  11619      y
10  12473   2480   8352   2052      r
Binding TFs: CUX1 (Homeobox domain, CUT domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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