DNA Binding Motif

						

			
Accessions: HSFY2_DBD_1 (HumanTF 1.0)

			
Names: HSFY2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimer of dimers; SELEX cycle: 3
Length: 15
Consensus: tTCGAAmmrwTCGAa
Weblogo: 
PSSM: P0      A      C      G      T
01    102     40     32    266      t
02     58      7     15    266      T
03     42    266     26      2      C
04      1     25    266     50      G
05    266     18      2      9      A
06    266     17     11     83      A
07     92     80     35     59      m
08     70    106     62     27      m
09    106     32    112     15      r
10    124     32     26    266      w
11     18     14      5    266      T
12     43    266     14      1      C
13      0     57    266     59      G
14    266     25      8     18      A
15    266     36     29     88      a
Binding TFs: HSFY2_DBD (HSF-type DNA-binding)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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