DNA Binding Motif

						

			
Accessions: HOXA13_full_2 (HumanTF 1.0)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 11
Consensus: wCTCGTAAAAm
Weblogo: 
PSSM: P0      A      C      G      T
01     83     42     55    120      w
02     18    300     17      0      C
03      0     19      0    300      T
04      0    300      0     59      C
05     48      6    300      5      G
06     13      3      0    300      T
07    300      1      0     21      A
08    300      0      0      0      A
09    300      0      0      0      A
10    300     10     31     58      A
11    124     78     32     66      m
Binding TFs: HOXA13_full (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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