DNA Binding Motif

						

			
Accessions: ESR2_HUMAN.H10MO.A|M01120 (HOCOMOCO 10)

			
Names: ESR2
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Steroid hormone receptors (NR3){2.1.1}; ER-like receptors (NR3A&B){2.1.1.2}
Length: 18
Consensus: mrGGtCAgksTGaCCykg
Weblogo: 
PSSM: P0      A      C      G      T
01    141    180    113     66      m
02    293     14    167     26      r
03     55      2    390     53      G
04     43     10    426     21      G
05     56     51    113    280      t
06      5    444     13     38      C
07    358     20     56     66      A
08     87    124    203     86      g
09      0      0    328    172      k
10     41    152    272     35      s
11     24     47     12    417      T
12     32     59    407      2      G
13    311    107     38     44      a
14      7    459     18     16      C
15     50    398      3     49      C
16     34    143     30    293      y
17     61     98    198    143      k
18    114     77    216     93      g
Binding TFs: ESR2_HUMAN (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains), Estrogen receptor beta)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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