DNA Binding Motif

						

			
Accessions: STAT1_MOUSE.H10MO.A|M01365 (HOCOMOCO 10)

			
Names: Stat1
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: STAT factors{6.2.1}; STAT1{6.2.1.0.1}
Length: 19
Consensus: ytttyasTTyCyyTTTyyy
Weblogo: 
PSSM: P0      A      C      G      T
01     64    184    121    130      y
02     64    104     58    273      t
03     27    114     41    317      t
04     40     81     50    328      t
05     51    285     38    125      y
06    273     27     81    118      a
07      5    224    224     46      s
08     18      8      2    471      T
09      4      7     14    474      T
10      5    177     12    305      y
11     10    381     10     98      C
12    102    143     46    208      y
13     84    183     88    144      y
14     43     41     24    391      T
15     15     42      8    434      T
16      3    119      7    370      T
17     32    301     16    150      y
18     54    181     24    240      y
19     43    152     86    218      y
Binding TFs: STAT1_MOUSE (SH2 domain, STAT protein, all-alpha domain, STAT protein, DNA binding domain, STAT protein, protein interaction domain, STAT1 TAZ2 binding domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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