DNA Binding Motif

						

			
Accessions: MA2246.1 (JASPAR 2024)

			
Names: Jra
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: bacterial 1-hybrid
Length: 10
Consensus: aTGAsTCAyc
Weblogo: 
PSSM: P0      A      C      G      T
01    581    232    139     46      a
02      0      0      0   1000      T
03      0      0    767    232      G
04   1000      0      0      0      A
05     93    418    488      0      s
06      0      0     23    976      T
07      0   1000      0      0      C
08   1000      0      0      0      A
09      0    558     23    418      y
10     69    604    232     93      c
Binding TFs: P18289
			
Publications: Kim T, Yoon J, Cho H, Lee WB, Kim J, Song YH, Kim SN, Yoon JH, Kim-Ha J, Kim YJ. Downregulation of lipopolysaccharide response in Drosophila by negative crosstalk between the AP1 and NF-kappaB signaling modules. Nat Immunol 6:211-8 (2005). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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