DNA Binding Motif

						

			
Accessions: TEAD4_RFX5_2 (HumanTF2 1.0)

			
Names: TEAD4_RFX5
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 29
Consensus: rCATwCCwwamksssyywwtwtrgyAACs
Weblogo: 
PSSM: P0      A      C      G      T
01    158      6    214     12      r
02     64    372      9      0      C
03    372      0     11      0      A
04      0      5      3    372      T
05    279      6     43    372      w
06     17    372      1     17      C
07      7    291      1     73      C
08    141     47     86     98      w
09    131     75     72     93      w
10    150     52     85     84      a
11    103    111     80     78      m
12     89     81     97    105      k
13     70    110    120     72      s
14     73    118    131     50      s
15     57    138     93     84      s
16     80    116     76    100      y
17     90     95     88     99      y
18    102     58     70    142      w
19    119     56     56    141      w
20     81     72     77    142      t
21     94     86     58    134      w
22     86     91     74    121      t
23    118     80    121     53      r
24    127     16    372     48      g
25     31    372     15    143      y
26    372      5      9     30      A
27    372      5     14      5      A
28      0    372     12     11      C
29     77    117    150     28      s
Type: Heterodimer
Binding TFs: RFX5_TF2 (RFX DNA-binding domain, Poxvirus D5 protein-like)
TEAD4_TF1 (TEA/ATTS domain family)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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