DNA Binding Motif

Accessions: 4iqr_B (3D-footprint 20231221)
Names: Hepatocyte nuclear factor 4-alpha
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Multi-Domain Organization of the HNF4alpha Nuclear Receptor Complex on DNA
Length: 6
Consensus: AGGTCA
01 73 7 7 9 A
02 0 0 96 0 G
03 0 0 96 0 G
04 7 7 9 73 T
05 7 73 7 9 C
06 73 7 7 9 A
Binding TFs: 4iqr_B (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Binding Sites: 4iqr_C
Publications: Chandra V, Huang P, Potluri N, Wu D, Kim Y, Rastinejad F. Multidomain integration in the structure of the HNF-4α nuclear receptor complex. Nature 495:394-8 (2013). [Pubmed]

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