DNA Binding Motif

						

			
Accessions: 6o3t_AB (3D-footprint 20231221)

			
Names: Forkhead box protein C2
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structural basis of FOXC2 and DNA interactions
Length: 11
Consensus: GTTTATAAACA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      0      0      0     96      T
03      0      0      0     96      T
04      0      0      0     96      T
05     96      0      0      0      A
06      8      0      8     80      T
07     72      8      8      8      A
08     96      0      0      0      A
09     72      8      8      8      A
10      0     96      0      0      C
11     72      8      8      8      A
Type: Heterodimer
Binding TFs: 6o3t_A (Fork head domain)
6o3t_B (Fork head domain)
Binding Sites: 6o3t_C
6o3t_D
			
Publications: Li S, Pradhan L, Ashur S, Joshi A, Nam HJ. Crystal Structure of FOXC2 in Complex with DNA Target. ACS Omega 4:10906-10914 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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