DNA Binding Motif
| Accessions: | MA0514.2 (JASPAR 2024) |
| Names: | Sox3 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 11 |
| Consensus: | raACAATGgma |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3745 1834 3478 2921 r 02 4092 2777 2950 2159 a 03 11761 52 76 89 A 04 150 11125 178 525 C 05 11284 312 93 289 A 06 11623 143 143 69 A 07 573 150 104 11151 T 08 1617 133 10041 187 G 09 1759 1582 7664 973 g 10 3443 3407 2915 2213 m 11 3455 2887 2910 2726 a |
| Type: | Heterodimer |
| Binding TFs: | P53784 (HMG (high mobility group) box, Domain of unknown function (DUF1898), SOX transcription factor) P53784 |
| Binding Sites: | MA0514.2.1 / MA0514.2.2 MA0514.2.10 / MA0514.2.17 MA0514.2.11 / MA0514.2.18 MA0514.2.12 MA0514.2.13 / MA0514.2.20 MA0514.2.14 MA0514.2.15 / MA0514.2.16 MA0514.2.17 MA0514.2.18 MA0514.2.19 MA0514.2.2 / MA0514.2.5 MA0514.2.20 MA0514.2.3 / MA0514.2.6 MA0514.2.4 / MA0514.2.7 MA0514.2.5 MA0514.2.6 / MA0514.2.9 MA0514.2.11 / MA0514.2.7 MA0514.2.13 / MA0514.2.8 MA0514.2.16 / MA0514.2.9 MA0514.2.1 MA0514.2.10 MA0514.2.12 MA0514.2.14 MA0514.2.15 MA0514.2.19 MA0514.2.3 MA0514.2.4 MA0514.2.8 |
| Publications: | Collignon J., Sockanathan S., Hacker A., Cohen-Tannoudji M., Norris D., Rastan S., Stevanovic M., Goodfellow P. N., Lovell-Badge R. A comparison of the properties of Sox-3 with Sry and two related genes, Sox-1 and Sox-2. Development 122:509-520 (1996). [Pubmed] |
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