DNA Binding Motif

						

			
Accessions: ZNF580_5 (HT-SELEX2 May2017)

			
Names: ZNF580
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 19
Consensus: cCTACCcymcmmCTACCct
Weblogo: 
PSSM: P0      A      C      G      T
01    450    951    401    135      c
02    111   1451     80    195      C
03    134    146     19   1493      T
04   1508     84     20     54      A
05     34   1525     12     24      C
06     36   1517     27     31      C
07    342   1234    296    397      c
08    255    519     79    921      y
09    440    541    160    380      m
10    278    644    224    374      c
11    451    427    314    329      m
12    594    811    355    110      m
13    140   1467     73    156      C
14    135    138     18   1497      T
15   1504     60     37     53      A
16     41   1513      3     18      C
17     40   1517     26      7      C
18    381   1293    339    387      c
19    348    457     83    960      t
Binding TFs: ZNF580 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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