DNA Binding Motif

						

			
Accessions: RORC_4 (HT-SELEX2 May2017)

			
Names: RORC
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: tRGGtCrTGACCya
Weblogo: 
PSSM: P0      A      C      G      T
01     93     97    138    496      t
02    603     21    222     24      R
03     14     39    824    167      G
04     16     38    824     52      G
05    107    161    272    824      t
06     23    824     23     27      C
07    547      2    277      4      r
08      0     19      3    824      T
09     42      6    824      0      G
10    824    119    100     41      A
11     13    824      9     21      C
12     74    824     21      1      C
13     15    239     34    585      y
14    496    148    108     71      a
Binding TFs: RORC (Zinc finger, C4 type (two domains))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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