DNA Binding Motif

						

			
Accessions: M0859 (AthalianaCistrome v4_May2016)

			
Names: ATHB33.ampDAP, T00023;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: wwwwahrTrATTAry
Weblogo: 
PSSM: P0      A      C      G      T
01    281     46     35    223      w
02    321     71     46    147      w
03    289     66     55    175      w
04    229     98     86    172      w
05    220    126    102    137      a
06    147    180    104    154      h
07    227     30    254     74      r
08      0     14      0    571      T
09    331     72    182      0      r
10    580      0      5      0      A
11      0      0      0    585      T
12      0      0      0    585      T
13    585      0      0      0      A
14    352     22    194     17      r
15     42    153    137    253      y
Binding TFs: T00023 (ZF-HD protein dimerisation region)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.