DNA Binding Motif

						

			
Accessions: HOXC11_4 (HT-SELEX2 May2017)

			
Names: HOXC11
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: rGymATWAAah
Weblogo: 
PSSM: P0      A      C      G      T
01    945    369   1292    517      r
02    367    324   2237     70      G
03      0   1042      0   1195      y
04   2237   2437    169    238      m
05   2237     74    310      0      A
06      0      2      0   2237      T
07   2237     22      0    797      W
08   2237      0      0      9      A
09   2237      4      0     42      A
10   2237    443    256    604      a
11    588    727    362    560      h
Binding TFs: HOXC11 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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