DNA Binding Motif
| Accessions: | MA1662.2 (JASPAR 2024) |
| Names: | AT3G10030 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 8 |
| Consensus: | TTAACAGA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 66 60 55 829 T 02 30 12 4 964 T 03 965 12 22 11 A 04 972 11 16 11 A 05 22 958 8 22 C 06 765 20 199 26 A 07 16 8 962 24 G 08 873 53 9 75 A |
| Type: | Heterodimer |
| Binding TFs: | Q94JR1 (Amino acid kinase family, Alcohol dehydrogenase transcription factor Myb/SANT-like, Myb/SANT-like DNA-binding domain) Q94JR1 |
| Binding Sites: | MA1662.2.1 / MA1662.2.12 / MA1662.2.13 / MA1662.2.17 / MA1662.2.18 / MA1662.2.2 / MA1662.2.5 MA1662.2.10 / MA1662.2.7 MA1662.2.11 / MA1662.2.6 MA1662.2.14 / MA1662.2.15 / MA1662.2.16 / MA1662.2.4 / MA1662.2.8 / MA1662.2.9 MA1662.2.19 MA1662.2.20 MA1662.2.3 |
| Publications: | Lambert SA, Yang AWH, Sasse A, Cowley G, Albu M, Caddick MX, Morris QD, Weirauch MT, Hughes TR. Similarity regression predicts evolution of transcription factor sequence specificity. Nat Genet 51:981-989 (2019). [Pubmed] |
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