DNA Binding Motif
| Accessions: | MA1146.2 (JASPAR 2024) |
| Names: | NR1H4::RXRA |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | SMiLE-seq |
| Length: | 13 |
| Consensus: | rGkTCAtTGACCy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 653 55 280 11 r 02 29 15 937 19 G 03 22 9 646 324 k 04 24 49 101 826 T 05 11 875 13 100 C 06 720 13 249 17 A 07 144 121 75 660 t 08 23 92 48 838 T 09 108 102 753 37 G 10 763 112 78 48 A 11 134 773 9 83 C 12 113 798 38 51 C 13 25 383 71 521 y |
| Type: | Heterodimer |
| Binding TFs: | Q96RI1 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains)) Q96RI1 |
| Publications: | Laffitte B. A., Kast H. R., Nguyen C. M., Zavacki A. M., Moore D. D., Edwards P. A. Identification of the DNA binding specificity and potential target genes for the farnesoid X-activated receptor.. J. Biol. Chem. 275:10638-10647 (2000). [Pubmed] |
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