DNA Binding Motif

						

			
Accessions: ATF4_TEF (HumanTF2 1.0)

			
Names: ATF4_TEF
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: rkmTGAYGCAATm
Weblogo: 
PSSM: P0      A      C      G      T
01    936     85   2001    450      r
02    317    279   1568    772      k
03   1907   1029    263      0      m
04      9      0     23   2936      T
05     22      0   2936     13      G
06   2936      0     27      0      A
07      0   1244      2   2936      Y
08      0     22   2936      2      G
09      0   2936      0     81      C
10   2936      0      0      4      A
11   2936      0      8      0      A
12     52    513     52   2936      T
13   1463   1081    236    157      m
Type: Heterodimer
Binding TFs: ATF4_TF1 / ATF4_TF2 (bZIP transcription factor, Basic region leucine zipper)
TEF_TF1 / TEF_TF2 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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