DNA Binding Motif

						

			
Accessions: NFATC2_4 (HT-SELEX2 May2017)

			
Names: NFATC2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 18
Consensus: tTTTCCrytaryGGAAAa
Weblogo: 
PSSM: P0      A      C      G      T
01   2288   2218   3502   6137      t
02   1195    173   2100  14145      T
03      6     19      3  14145      T
04      0     10     10  14145      T
05      5  14145      1     13      C
06      3  14145      5      0      C
07   9741    130   4405    519      r
08   1193   3806    708   8438      y
09   2593   3169   2248   6136      t
10   6108   2377   3060   2601      a
11   8386    712   3810   1237      r
12    492   4400     90   9746      y
13      0      1  14145      3      G
14     12      6  14145      1      G
15  14145     13     15      3      A
16  14145      5     16      3      A
17  14145   2224    183   1167      A
18   6151   3389   2300   2305      a
Binding TFs: NFATC2 (Rel homology domain (RHD), IPT/TIG domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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