DNA Binding Motif

						

			
Accessions: NANOG_methyl_1 (HT-SELEX2 May2017)

			
Names: NANOG
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: ttRAkkrs
Weblogo: 
PSSM: P0      A      C      G      T
01   3856   4900   4981  10012      t
02   1434   3552    642  10012      t
03  10012      0   4200      0      R
04  10012   1427    332      0      A
05   1380   1944   4421   5591      k
06   1238   2743   5506  10012      k
07   6478      1  10012      0      r
08   1730   3336   2552   2395      s
Binding TFs: NANOG (Homeobox domain, Homeodomain leucine-zipper encoding, Homez)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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