DNA Binding Motif

						

			
Accessions: M0752 (AthalianaCistrome v4_May2016)

			
Names: T13995;, TCP20.DAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: waaadarmwdGTGGGrCCCAC
Weblogo: 
PSSM: P0      A      C      G      T
01    196     75    127    192      w
02    247    107    116    120      a
03    159    147    146    138      a
04    268     95    129     98      a
05    171    104    159    156      d
06    253     88    143    106      a
07    180     81    193    136      r
08    169    170    115    136      m
09    219     75    105    191      w
10    157     88    172    173      d
11     72     20    479     19      G
12     18     47     42    483      T
13     59      5    484     42      G
14      3      0    584      3      G
15      4      0    586      0      G
16    282     10    254     44      r
17     24    520      4     42      C
18      0    590      0      0      C
19      1    573      1     15      C
20    543      0     47      0      A
21     16    433     42     99      C
Binding TFs: T13995 (TCP family transcription factor)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.