DNA Binding Motif
| Accessions: | MA0363.2 (JASPAR 2024) |
| Names: | REB1 |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-exo |
| Length: | 15 |
| Consensus: | wtyrTTACCCGgmyw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 212 114 109 256 w 02 159 167 146 219 t 03 86 177 113 315 y 04 281 79 281 50 r 05 8 20 5 658 T 06 28 28 7 628 T 07 679 1 3 8 A 08 2 684 2 3 C 09 4 681 5 1 C 10 3 681 3 4 C 11 11 5 578 97 G 12 104 133 377 77 g 13 296 244 58 93 m 14 133 178 118 262 y 15 186 115 147 243 w |
| Type: | Heterodimer |
| Binding TFs: | P21538 (Myb-like DNA-binding domain, Myb-like DNA-binding domain) P21538 |
| Binding Sites: | MA0363.2.1 MA0363.2.10 / MA0363.2.8 MA0363.2.11 / MA0363.2.9 MA0363.2.10 / MA0363.2.12 MA0363.2.11 / MA0363.2.13 MA0363.2.12 / MA0363.2.14 MA0363.2.13 / MA0363.2.15 MA0363.2.14 / MA0363.2.16 MA0363.2.15 / MA0363.2.17 MA0363.2.16 / MA0363.2.18 MA0363.2.17 / MA0363.2.19 MA0363.2.2 MA0363.2.18 / MA0363.2.20 MA0363.2.3 MA0363.2.3 / MA0363.2.4 MA0363.2.4 / MA0363.2.5 MA0363.2.6 MA0363.2.5 / MA0363.2.7 MA0363.2.6 / MA0363.2.8 MA0363.2.7 / MA0363.2.9 MA0363.2.19 MA0363.2.20 |
| Publications: | Badis G, Chan E.T, van Bakel H, Pena-Castillo L, Tillo D, Tsui K, Carlson C.D, Gossett A.J, Hasinoff M.J, Warren C.L, Gebbia M, Talukder S, Yang A, Mnaimneh S, Terterov D, Coburn D, Li Yeo A, Yeo Z.X, Clarke N.D, Lieb J.D, Ansari A.Z, Nislow C, Hughes T.R. A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. Molecular cell 32:878-87 (2008). [Pubmed] |
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