DNA Binding Motif

						

			
Accessions: 3kmp_AB (3D-footprint 20231221)

			
Names: SMAD1-MH1
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of SMAD1-MH1/DNA complex
Length: 10
Consensus: TGTCTAGaCT
Weblogo: 
PSSM: P0      A      C      G      T
01      3      3      3     87      T
02      0      0     96      0      G
03      3      5     19     69      T
04      2     88      3      3      C
05      0      0      0     96      T
06     96      0      0      0      A
07      3      3     71     19      G
08     63     15     15      3      a
09      0     96      0      0      C
10      3      6      3     84      T
Type: Heterodimer
Binding TFs: 3kmp_A (MH1 domain)
3kmp_B (MH1 domain)
Binding Sites: 3kmp_C
3kmp_D
			
Publications: BabuRajendran N, Palasingam P, Narasimhan K, Sun W, Prabhakar S, Jauch R, Kolatkar P.R. Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF-beta effectors. Nucleic acids research 38:3477-88 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.