DNA Binding Motif

Accessions: POU1F1_4 (HT-SELEX2 May2017)
Names: POU1F1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: dTAATgAkATGCry
Weblogo:
PSSM: P0 A C G T
01 2537 1919 2677 2879 d
02 814 342 43 10012 T
03 10012 51 162 8 A
04 10012 6 13 2 A
05 9 267 15 10012 T
06 731 1228 10012 3187 g
07 10012 24 588 428 A
08 163 1361 5936 4075 k
09 10012 34 52 42 A
10 0 8 3 10012 T
11 672 6 10012 1769 G
12 13 10012 87 203 C
13 5403 489 4609 665 r
14 2163 2606 1907 3336 y
Binding TFs: POU1F1 (Homeobox domain, Pou domain - N-terminal to homeobox domain)
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.