DNA Binding Motif

						

			
Accessions: UN0324.2 (JASPAR 2024)

			
Names: ZNF436
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 22
Consensus: CaCCTCCTCCAGGAAGCCyTCC
Weblogo: 
PSSM: P0      A      C      G      T
01    116   2911    137    697      C
02   2112    395    777    577      a
03     82   3549     63    167      C
04     19   3104     47    691      C
05    190     73    158   3440      T
06     81   3696     28     56      C
07     64   3262     31    504      C
08     93    113     53   3602      T
09     82   3566     64    149      C
10    130   3445     15    271      C
11   3196     66    426    173      A
12    339     27   3163    332      G
13     69     11   3772      9      G
14   3329    304    197     31      A
15   3630     30    157     44      A
16     14      5   3835      7      G
17    117   2906    260    578      C
18     66   3619     25    151      C
19     97   1455     48   2261      y
20    151    352    227   3131      T
21     30   3621     31    179      C
22    108   3246     85    422      C
Type: Heterodimer
Binding TFs: Q9C0F3 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q9C0F3
Binding Sites: UN0324.2.1
UN0324.2.10
UN0324.2.11
UN0324.2.12
UN0324.2.13
UN0324.2.14
UN0324.2.15
UN0324.2.16
UN0324.2.17
UN0324.2.18
UN0324.2.19
UN0324.2.2
UN0324.2.20
UN0324.2.3
UN0324.2.4
UN0324.2.5
UN0324.2.6
UN0324.2.7
UN0324.2.8
UN0324.2.9
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.