DNA Binding Motif

						

			
Accessions: MA1081.2 (JASPAR 2024)

			
Names: WRKY25
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 16
Consensus: wwwwwrGTCAACGdww
Weblogo: 
PSSM: P0      A      C      G      T
01    393    181    277    377      w
02    416    248    210    354      w
03    423    236    218    351      w
04    427    212    129    460      w
05    328    179    131    590      w
06    444     24    731     29      r
07      9      7   1202     10      G
08      3      7      0   1218      T
09      4   1217      4      3      C
10   1215      4      4      5      A
11   1201      5     13      9      A
12    130   1002     18     78      C
13    149     53    927     99      G
14    348    227    320    333      d
15    326    259    181    462      w
16    382    212    254    380      w
Type: Heterodimer
Binding TFs: O22921 (WRKY DNA -binding domain)
O22921
Binding Sites: MA1081.2.3
MA1081.2.8
MA1081.2.9
MA1081.2.11
MA1081.2.6
MA1081.2.13
MA1081.2.14
MA1081.2.15
MA1081.2.16
MA1081.2.18
MA1081.2.1
MA1081.2.10
MA1081.2.12
MA1081.2.17
MA1081.2.19
MA1081.2.2
MA1081.2.20
MA1081.2.4
MA1081.2.5
MA1081.2.7
			
Publications:  Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.