DNA Binding Motif

						

			
Accessions: TGIF2LX_2 (HT-SELEX2 May2017)

			
Names: TGIF2LX
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: TGACAgcTGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01    264    212    106   1736      T
02     58    137   1736     44      G
03   1736     72     75    193      A
04     46   1736     35     47      C
05   1736     39    264     42      A
06     31    364   1023    318      g
07    282   1089    326     39      c
08     48    201     19   1736      T
09     40     51   1736     49      G
10    160    104     59   1736      T
11     47   1736    142     53      C
12   1736    149    265    321      A
Binding TFs: TGIF2LX (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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