DNA Binding Motif

						

			
Accessions: P63_HUMAN.H10MO.A|M01413 (HOCOMOCO 10)

			
Names: TP63
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: p53-related factors{6.3.1}; p63{6.3.1.0.2}
Length: 19
Consensus: rgrCAwGyctGgrCwTGyy
Weblogo: 
PSSM: P0      A      C      G      T
01    111     57    164     62      r
02     95     25    187     87      g
03    177      8    184     25      r
04      3    384      3      4      C
05    290     36     15     53      A
06    125     13     61    195      w
07      0      0    393      1      G
08     78    155      2    159      y
09     78    202     18     96      c
10     85      7     91    211      t
11     40     13    317     24      G
12     66     56    242     30      g
13    227      3    132     32      r
14     25    367      1      1      C
15    169     52      4    169      w
16     21     46     23    304      T
17     25      1    367      1      G
18     40    162      6    186      y
19     88    155     42    109      y
Binding TFs: P63_HUMAN (P53 DNA-binding domain, SAM domain (Sterile alpha motif), P53 tetramerisation motif)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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