DNA Binding Motif

						

			
Accessions: CUX1_DBD_2 (HumanTF 1.0)

			
Names: CUX1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3
Length: 18
Consensus: ATCRATmmsstrATCrAT
Weblogo: 
PSSM: P0      A      C      G      T
01  15138    139    384    888      A
02    262    380    170  15138      T
03    395  15138    271   1086      C
04   4465    172  10673    115      R
05  15138    125    190    283      A
06   1235    487    159  15138      T
07   5584   4483   1547   3525      m
08   6339   3897   2393   2510      m
09   3781   4679   4113   2566      s
10   3599   4805   3851   2884      s
11   3168   2399   2939   6633      t
12   5521   1022   5784   2812      r
13  15138    156    461    612      A
14    209    345    182  15138      T
15    237  15138    184    492      C
16   6338    242   8801    184      r
17  15138    188    251    423      A
18   1203    307    150  15138      T
Binding TFs: CUX1_DBD (Homeobox domain, CUT domain, Homeobox KN domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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