DNA Binding Motif

						

			
Accessions: M0021 (AthalianaCistrome v4_May2016)

			
Names: At2g33710.ampDAP, T11242;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 18
Consensus: dcCGCCGCCGymwyhkym
Weblogo: 
PSSM: P0      A      C      G      T
01    165     72    153    210      d
02     70    291     90    149      c
03     83    463     29     25      C
04     28     10    451    111      G
05      0    477    109     14      C
06     18    580      2      0      C
07      4      0    596      0      G
08      4    566      6     24      C
09     25    574      1      0      C
10    105      3    470     22      G
11     39    265     34    262      y
12    188    241     25    146      m
13    276     18    129    177      w
14    118    221     42    219      y
15    170    206     55    169      h
16    130     61    204    205      k
17     86    246    102    166      y
18    155    249     65    131      m
Binding TFs: T11242 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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