DNA Binding Motif

						

			
Accessions: PAX7_4 (HT-SELEX2 May2017)

			
Names: PAX7
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: rtAATyGATTay
Weblogo: 
PSSM: P0      A      C      G      T
01   4794   4587   5270   4490      r
02   8679   3831   4069  19142      t
03  19142    500   1480     81      A
04  19142      0     12      0      A
05     62   1305     30  19142      T
06      0   8047    996  11095      y
07   1038   1547  19142      0      G
08  19142     64   1392     86      A
09      0      0      0  19142      T
10    172   1362    407  19142      T
11  19142   5937   5603   9827      a
12   4384   5105   4751   4901      y
Binding TFs: PAX7 (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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