DNA Binding Motif

						

			
Accessions: EEAD0073 (EEADannot 2025-01-07)

			
Names: CmWIP1
Organisms: Cucumis melo
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 13
Consensus: wwACCTTGAttww
Weblogo: 
PSSM: P0      A      C      G      T
01   2225   1313   1456   1935      w
02   2109   1044    904   2872      w
03   5527    392    654    356      A
04    254   6442    104    129      C
05    142   6588     97    102      C
06    112     53    322   6442      T
07    372    540    749   5268      T
08     91    135   6564    139      G
09   6335    160     66    368      A
10    476    957   1119   4377      t
11   1544   1396   1378   2611      t
12   2055   1171   1002   2701      w
13   1854   1335   1430   2310      w
Binding TFs: CmWIP1 (Zinc-finger double domain)
			
Publications: Zhang S, Tan FQ, Chung CH, Slavkovic F, Devani RS, Troadec C, Marcel F, Morin H, Camps C, Gomez Roldan MV, Benhamed M, Dogimont C, Boualem A, Bendahmane A. <b>The control of carpel determinacy pathway leads to sex determination</b> <b>in cucurbits</b> Science. 2022 Nov 4;378(6619):543-549 : (doi:). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.