DNA Binding Motif

						

			
Accessions: IRF7_2 (HT-SELEX2 May2017)

			
Names: IRF7
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 15
Consensus: mCGAAAvYGAAAvya
Weblogo: 
PSSM: P0      A      C      G      T
01    996   1021    459    632      m
02    291   2627    403    481      C
03    214    281   3108    197      G
04   3108     31     62     25      A
05   3108     16     19     41      A
06   3108     17     26    266      A
07    923    793   1245    147      v
08    119   2257     64    851      Y
09     90      0   3108     10      G
10   3108     59     80     29      A
11   3108     10     20     31      A
12   3108     62     18    311      A
13    882    976    843    407      v
14    561   1127    240   1981      y
15   1187    603    719    598      a
Binding TFs: IRF7 (Interferon regulatory factor transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.