DNA Binding Motif

Accessions: MA2162.1 (JASPAR 2024)
Names: ceh-60
Organisms: Caenorhabditis elegans
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 9
Consensus: TGATTGRCA
Weblogo:
PSSM: P0 A C G T
01 427 156 88 2602 T
02 225 41 2882 125 G
03 3174 18 31 50 A
04 156 59 171 2887 T
05 133 41 110 2989 T
06 21 10 3215 27 G
07 2336 33 845 59 R
08 55 3001 25 192 C
09 2780 40 354 99 A
Binding TFs: Q45EK2
Binding Sites: MA2162.1.1 / MA2162.1.2 / MA2162.1.9
MA2162.1.10
MA2162.1.11 / MA2162.1.12 / MA2162.1.7
MA2162.1.13
MA2162.1.14
MA2162.1.15 / MA2162.1.19 / MA2162.1.6 / MA2162.1.8
MA2162.1.16
MA2162.1.17
MA2162.1.18
MA2162.1.20
MA2162.1.3
MA2162.1.4
MA2162.1.5
Publications: Dowen RH. CEH-60/PBX and UNC-62/MEIS Coordinate a Metabolic Switch that Supports Reproduction in C. elegans 49:235-250 (Dev). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.