DNA Binding Motif

						

			
Accessions: FOXP1_2 (HT-SELEX2 May2017)

			
Names: FOXP1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 30
Consensus: wTGTTTrybrTsvvwhrysAyrsAMAACAm
Weblogo: 
PSSM: P0      A      C      G      T
01   1514   1218   1477   1720      w
02    177    131     48   5930      T
03   1628      2   5930      0      G
04    118    253     16   5930      T
05    237     25   1155   5930      T
06      1      0   1791   5930      T
07   3449     64   2480    978      r
08     19   3202    824   1885      y
09    809   2012   1505   1604      b
10   3055    207   2006    663      r
11    610    980    214   4126      T
12   1317   1650   1921   1041      s
13   1723   1948   1507    752      v
14   1528   1665   1587   1149      v
15   1510   1344   1457   1618      w
16   1486   1541   1205   1698      h
17   1743   1454   1656   1077      r
18    739   2274   1338   1579      y
19   1172   1824   2159    775      s
20   4766    134    552    478      A
21    269   2358    101   3202      y
22   1832    676   2904    518      r
23   1421   1982   2174    352      s
24   4587    409    348   1342      A
25   2583   5930      6    132      M
26   5930     88     24    187      A
27   5930      2    108    104      A
28      0   5930      4   1259      C
29   5930     68     86    258      A
30   1884   1597    975   1473      m
Binding TFs: FOXP1 (Fork head domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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