DNA Binding Motif

						

			
Accessions: GCM1_2 (HT-SELEX2 May2017)

			
Names: GCM1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 9
Consensus: rTGcGGGtr
Weblogo: 
PSSM: P0      A      C      G      T
01    874    107    732      0      r
02     38     64    290   1606      T
03    350     22   1606      0      G
04    258   1606    487    258      c
05      8      0   1606    287      G
06    112    156   1606    151      G
07     53     15   1606     58      G
08    351    602    503   1606      t
09    433    240    754    178      r
Binding TFs: GCM1 (GCM motif protein)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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