DNA Binding Motif

						

			
Accessions: MA1521.2 (JASPAR 2024)

			
Names: MAFA
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 13
Consensus: TGCTGAsTCAGCa
Weblogo: 
PSSM: P0      A      C      G      T
01    673   1857    316   6277      T
02    304    206   8343    119      G
03    970   7939    185    540      C
04    973    986    451   8138      T
05    668    475   8028   1291      G
06   7498   1615    317   1231      A
07    602   3985   4024    657      s
08   1281    240   1781   7524      T
09   1204   7985    422    715      C
10   8128    453    889   1123      A
11    473    104   7957    973      G
12     26   8371    221    258      C
13   6132    223   1956    802      a
Type: Heterodimer
Binding TFs: Q8NHW3 (bZIP Maf transcription factor, Maf N-terminal region)
Q8NHW3
			
Publications: Matsushima-Hibiya Y, Nishi S, Sakai M. Rat maf-related factors: the specificities of DNA binding and heterodimer formation. Biochemical and biophysical research communications 245:412-8 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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