DNA Binding Motif

						

			
Accessions: UN0391.2 (JASPAR 2024)

			
Names: AT3G58630
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 10
Consensus: TCGCCGGAGa
Weblogo: 
PSSM: P0      A      C      G      T
01     97    150     59    694      T
02     38    804     45    114      C
03    139      2    859      0      G
04     29    950      0     22      C
05      0   1000      0      0      C
06      0      0   1000      0      G
07      0      0   1000      0      G
08    793    101     29     77      A
09    241     27    701     31      G
10    575    105    114    207      a
Type: Heterodimer
Binding TFs: Q8GXR6 (Myb/SANT-like DNA-binding domain)
Q8GXR6
			
	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.