DNA Binding Motif
| Accessions: | MA0899.2 (JASPAR 2024) |
| Names: | HOXA10 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | HT-SELEX |
| Length: | 9 |
| Consensus: | gymATWAAa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 2425 1757 8381 1341 g 02 153 3867 59 4515 y 03 8381 4516 1022 957 m 04 8381 455 718 267 A 05 367 11 0 8381 T 06 5960 84 121 2422 W 07 8381 36 76 384 A 08 8381 568 125 331 A 09 8381 2082 1560 2058 a |
| Type: | Heterodimer |
| Binding TFs: | P31260 (Homeobox domain) P31260 |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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