DNA Binding Motif

						

			
Accessions: RFX2_methyl_1 (HT-SELEX2 May2017)

			
Names: RFX2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: sGTTrCCATGGyAACg
Weblogo: 
PSSM: P0      A      C      G      T
01   2212   9102   5204   3966      s
02    106      4  20483      1      G
03     11     42     15  20483      T
04   4912   3672     27  20483      T
05   8000    333  12483   3266      r
06      7  20483    308   6743      C
07      3  20483      5   5059      C
08  20483      9   4994    116      A
09    117   5077     10  20483      T
10   5077      7  20483      2      G
11   6614    303  20483      9      G
12   3309  12507    354   7976      y
13  20483     20   3614   5012      A
14  20483     20     37     14      A
15      7  20483      5    111      C
16   3995   5087   9174   2227      g
Binding TFs: RFX2 (RFX DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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